结核与肺部疾病杂志 ›› 2020, Vol. 1 ›› Issue (1): 6-10.doi: 10.3969/j.issn.2096-8493.2020.01.003
收稿日期:
2020-04-02
出版日期:
2020-06-30
发布日期:
2020-07-07
通信作者:
谢建平
E-mail:georgex@swu.edu.cn
Received:
2020-04-02
Online:
2020-06-30
Published:
2020-07-07
Contact:
XIE Jian-ping
E-mail:georgex@swu.edu.cn
摘要:
新型冠状病毒[严重急性呼吸综合征冠状病毒2(severe acute respiratory syndrome coronavirus 2,SARS-CoV-2)]导致的新型冠状病毒肺炎(coronavirus disease 2019,COVID-19)在全球流行。由于缺乏特定的抗病毒治疗方案并疫苗研制周期漫长,对其分子生物学进行深入研究以寻找新的药物靶标和药物十分重要。作为正义单链 RNA病毒,其在宿主细胞内的复制依赖自身的RNA依赖性RNA聚合酶(RNA-dependent RNA polymerase,RdRp)的作用。针对人冠状病毒RdRp 的高保守性,作者在介绍SARS-CoV-2的RdRp 结构和功能的基础上,归纳相关病毒RdRp 抑制剂的研究进展,从中寻找可用于抑制 SARS-CoV-2 的 RdRp 功能的药物,为 COVID-19 的治疗提供参考。
李港, 谢建平. 新型冠状病毒RNA复制酶及其潜在抑制剂研究现状[J]. 结核与肺部疾病杂志, 2020, 1(1): 6-10. doi: 10.3969/j.issn.2096-8493.2020.01.003
LI Gang, XIE Jian-ping. Progresses on the SARS-CoV-2 RNA-dependent RNA polymerase and potential anti-SARS-CoV-2 inhibitors[J]. Journal of Tuberculosis and Lung Disease, 2020, 1(1): 6-10. doi: 10.3969/j.issn.2096-8493.2020.01.003
[1] | World Health Organization. Novel Coronavirus(2019-nCoV) Situation Report-22. Geneva: World Health Organization, 2020. |
[2] |
Coronaviridae Study Group of the International Committee on Taxonomy of Viruses. The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2. Nat Microbiol, 2020,5(4):536-544. doi: 10.1038/s41564-020-0695-z.
URL pmid: 32123347 |
[3] |
Sheahan TP, Sims AC, Leist SR, et al. Comparative therapeutic efficacy of remdesivir and combination lopinavir, ritonavir, and interferon beta against MERS-CoV. Nat Commun, 2020,11(1):222. doi: 10.1038/s41467-019-13940-6.
doi: 10.1038/s41467-019-13940-6 URL pmid: 31924756 |
[4] | Arabi YM, Asiri AY, Assiri AM, et al. Treatment of Middle East respiratory syndrome with a combination of lopinavir/ritonavir and interferon-beta1b (MIRACLE trial): statistical analysis plan for a recursive two-stage group sequential randomized controlled trial. Trials, 2020,21(1):8. doi: 10.1186/s13063-019-3846-x. |
[5] |
Arabi YM, Alothman A, Balkhy HH, et al. Treatment of Middle East Respiratory Syndrome with a combination of lopinavir-ritonavir and interferon-beta1b (MIRACLE trial): study protocol for a randomized controlled trial. Trials, 2018,19(1):81. doi: 10.1186/s13063-017-2427-0.
URL pmid: 29382391 |
[6] | 中华人民共和国国家卫生健康委员会办公厅. 新型冠状病毒肺炎防控方案(第五版). 国卫办疾控函[2020]156号. 2020-02-21. |
[7] |
Chan JF, Lau SK, To KK, et al. Middle East respiratory syndrome coronavirus: another zoonotic betacoronavirus causing SARS-like disease. Clin Microbiol Rev, 2015,28(2):465-522. doi: 10.1128/CMR.00102-14.
doi: 10.1128/CMR.00102-14 URL |
[8] |
Lange CM, Sarrazin C, Zeuzem S. Review article: specifically targeted anti-viral therapy for hepatitis C-a new era in therapy. Aliment Pharmacol Ther, 2010,32(1):14-28. doi: 10.1111/j.1365-2036.2010.04317.x.
doi: 10.1111/j.1365-2036.2010.04317.x URL |
[9] |
Cleri DJ, Ricketti AJ, Vernaleo JR. Severe acute respiratory syndrome (SARS). Infect Dis Clin North Am, 2010,24(1):175-202. doi: 10.1016/j.idc.2009.10.005.
doi: 10.1016/j.idc.2009.10.005 URL |
[10] |
Arabi YM, Balkhy HH, Hayden FG, et al. Middle East Respiratory Syndrome. N Engl J Med, 2017,376(6):584-594. doi: 10.1056/NEJMsr1408795.
doi: 10.1056/NEJMsr1408795 URL pmid: 28177862 |
[11] |
Zumla A, Chan JF, Azhar EI, et al. Coronaviruses-drug discovery and therapeutic options. Nat Rev Drug Discov, 2016,15(5):327-347. doi: 10.1038/nrd.2015.37.
doi: 10.1038/nrd.2015.37 URL pmid: 26868298 |
[12] |
Ung COL. Community pharmacist in public health emergencies: Quick to action against the coronavirus 2019-nCoV outbreak. Res Social Adm Pharm, 2020,16(4):583-586. doi: 10.1016/j.sapharm.2020.02.003.
doi: 10.1016/j.sapharm.2020.02.003 URL pmid: 32081569 |
[13] | Ksiazek TG, Erdman D, Goldsmith CS, et al. A novel coronavirus associated with severe acute respiratory syndrome. N Engl J Med, 2003,348(20):1953-1966. doi: 10.1056/NEJMoa030781. |
[14] |
Snijder EJ, Bredenbeek PJ, Dobbe JC, et al. Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage. J Mol Biol, 2003,331(5):991-1004. doi: 10.1016/s0022-2836(03)00865-9.
doi: 10.1016/s0022-2836(03)00865-9 URL pmid: 12927536 |
[15] |
Subissi L, Posthuma CC, Collet A, et al. One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities. Proc Natl Acad Sci U S A, 2014,111(37):E3900-3909. doi: 10.1073/pnas.1323705111.
doi: 10.1073/pnas.1323705111 URL pmid: 25197083 |
[16] |
Goldsmith CS, Tatti KM, Ksiazek TG, et al. Ultrastructural characterization of SARS coronavirus. Emerg Infect Dis, 2004,10(2):320-326. doi: 10.3201/eid1002.030913.
doi: 10.3201/eid1002.030913 URL pmid: 15030705 |
[17] |
Huang C, Wang Y, Li X, et al. Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China. Lancet, 2020,395(10223):497-506. doi: 10.1016/S0140-6736(20)30183-5.
doi: 10.1016/S0140-6736(20)30183-5 URL pmid: 31986264 |
[18] | Chan PK, Chan MC. Tracing the SARS-coronavirus. J Thorac Dis, 2013,5 Suppl 2: S118-121. doi: 10.3978/j.issn.2072-1439.2013.06.19. |
[19] |
Ziebuhr J. The coronavirus replicase. Curr Top Microbiol Immunol, 2005,287:57-94. doi: 10.1007/3-540-26765-4_3.
doi: 10.1007/3-540-26765-4_3 URL pmid: 15609509 |
[20] | Gao Y, Yan L, Huang Y, et al. Structure of RNA-dependent RNA polymerase from 2019-nCoV, a major antiviral drug target[J/OL]. bioRxiv, 2020 [2020-04-01]. doi: 10.1101/2020.03.16.993386. |
[21] |
Lehmann KC, Gulyaeva A, Zevenhoven Dobbe JC, et al. Discovery of an essential nucleotidylating activity associated with a newly delineated conserved domain in the RNA polymerase-containing protein of all nidoviruses. Nucleic Acids Res, 2015,43(17):8416-8434. doi: 10.1093/nar/gkv838.
doi: 10.1093/nar/gkv838 URL pmid: 26304538 |
[22] |
Appleby TC, Perry JK, Murakami E, et al. Viral replication. Structural basis for RNA replication by the hepatitis C virus polymerase. Science, 2015,347(6223):771-775. doi: 10.1126/science.1259210.
doi: 10.1126/science.1259210 URL pmid: 25678663 |
[23] |
Steinhauer DA, Domingo E, Holland JJ. Lack of evidence for proofreading mechanisms associated with an RNA virus polymerase. Gene, 1992,122(2):281-288. doi: 10.1016/0378-1119(92)90216-c.
doi: 10.1016/0378-1119(92)90216-c URL pmid: 1336756 |
[24] |
Eckerle LD, Becker MM, Halpin RA, et al. Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing. PLoS Pathog, 2010,6(5):e1000896. doi: 10.1371/journal.ppat.1000896.
doi: 10.1371/journal.ppat.1000896 URL pmid: 20463816 |
[25] |
Eckerle LD, Lu X, Sperry SM, et al. High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants. J Virol, 2007,81(22):12135-12144. doi: 10.1128/JVI.01296-07.
doi: 10.1128/JVI.01296-07 URL pmid: 17804504 |
[26] |
Smith EC, Blanc H, Surdel MC, et al. Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics. PLoS Pathog, 2013,9(8):e1003565. doi: 10.1371/journal.ppat.1003565.
doi: 10.1371/journal.ppat.1003565 URL pmid: 23966862 |
[27] |
Graham RL, Donaldson EF, Baric RS. A decade after SARS: strategies for controlling emerging coronaviruses. Nat Rev Microbiol, 2013,11(12):836-848. doi: 10.1038/nrmicro3143.
doi: 10.1038/nrmicro3143 URL pmid: 24217413 |
[28] |
Du L, He Y, Zhou Y, et al. The spike protein of SARS-CoV—a target for vaccine and therapeutic development. Nat Rev Microbiol, 2009,7(3):226-236. doi: 10.1038/nrmicro2090.
doi: 10.1038/nrmicro2090 URL pmid: 19198616 |
[29] |
Pillaiyar T, Manickam M, Namasivayam V, et al. An Overview of Severe Acute Respiratory Syndrome-Coronavirus (SARS-CoV) 3CL Protease Inhibitors: Peptidomimetics and Small Molecule Chemotherapy. J Med Chem, 2016,59(14):6595-6628. doi: 10.1021/acs.jmedchem.5b01461.
doi: 10.1021/acs.jmedchem.5b01461 URL pmid: 26878082 |
[30] |
Delang L, Abdelnabi R, Neyts J. Favipiravir as a potential countermeasure against neglected and emerging RNA viruses. Antiviral Res, 2018,153:85-94. doi: 10.1016/j.antiviral.2018.03.00.
doi: 10.1016/j.antiviral.2018.03.003 URL pmid: 29524445 |
[31] |
Delang L, Segura Guerrero N, Tas A, et al. Mutations in the chikungunya virus non-structural proteins cause resistance to favipiravir (T-705), a broad-spectrum antiviral. J Antimicrob Chemother, 2014,69(10):2770-2784. doi: 10.1093/jac/dku209.
doi: 10.1093/jac/dku209 URL pmid: 24951535 |
[32] |
Olschlager S, Neyts J, Gunther S. Depletion of GTP pool is not the predominant mechanism by which ribavirin exerts its antiviral effect on Lassa virus. Antiviral Res, 2011,91(2):89-93. doi: 10.1016/j.antiviral.2011.05.006.
doi: 10.1016/j.antiviral.2011.05.006 URL pmid: 21616094 |
[33] |
Holshue ML, DeBolt C, Lindquist S, et al. First Case of 2019 Novel Coronavirus in the United States. N Engl J Med, 2020,382(10):929-936. doi: 10.1056/NEJMoa2001191.
doi: 10.1056/NEJMoa2001191 URL pmid: 32004427 |
[34] |
Cheng VC, Chan JF, To KK, et al. Clinical management and infection control of SARS: lessons learned. Antiviral Res, 2013,100(2):407-419. doi: 10.1016/j.antiviral.2013.08.016.
doi: 10.1016/j.antiviral.2013.08.016 URL pmid: 23994190 |
[1] | 刘伯飞, 王芳, 刘伯霞, 马玉杰, 冯涛, 徐麟, 赵桂霞, 洪苑, 刘广天, 周攀, 曹相原. 84例新型冠状病毒肺炎患者CT表现与免疫学指标的变化特点分析[J]. 结核与肺部疾病杂志, 2020, 1(3): 220-225. |
[2] | 黄进宝, 兰长青, 吕骁, 陈璐璐, 王新航, 陈玉榕, 黄明翔. 国外输入性新型冠状病毒肺炎23例诊疗经验分析[J]. 结核与肺部疾病杂志, 2020, 1(3): 213-219. |
[3] | 靳民路, 常蕴青, 齐凤鸣, 关晓岗, 郑冠华, 赵永华, 李震强, 李孝生, 王利芬, 王芳, 白印杰. 39例新型冠状病毒肺炎患者的临床特点及疗效分析[J]. 结核与肺部疾病杂志, 2020, 1(2): 131-135. |
[4] | 沈聪, 焦磊, 白璐, 张毅力, 郭佑民. 新型冠状病毒肺炎患者肺部CT病变质量及外周血淋巴细胞计数的动态演变分析[J]. 结核与肺部疾病杂志, 2020, 1(2): 126-130. |
[5] | 林明贵, 林金兰, 魏来, 张萍, 周碧琴, 张文砚, 华昊, 赵文静, 聂广孟, 苏立楠, 王小辉, 陈凯丽. 新型冠状病毒感染疫情期间以发热门诊为核心的综合医院防控策略[J]. 结核与肺部疾病杂志, 2020, 1(2): 109-111. |
[6] | 邓国防, 雷建平. 新型冠状病毒肺炎诊治要点浅析[J]. 结核病与肺部健康杂志, 2020, 9(1): 7-10. |
[7] | 黄毅, 王思翰, 郑楚云, 刘月, 张耀辉. 新型冠状病毒肺炎患者不同发病时期肺周病变超声成像表现的初步探讨[J]. 结核病与肺部健康杂志, 2020, 9(1): 25-31. |
[8] | 余辉山, 秦立新, 丁晨宇, 刘静, 李宝学, 李政旻. 250例新型冠状病毒肺炎高分辨率CT特征分析[J]. 结核病与肺部健康杂志, 2020, 9(1): 19-24. |
[9] | 彭鹏, 余辉山, 周新华. 新型冠状病毒肺炎的临床特点与CT诊断价值[J]. 结核病与肺部健康杂志, 2020, 9(1): 11-15. |
阅读次数 | ||||||
全文 |
|
|||||
摘要 |
|
|||||