Journal of Tuberculosis and Lung Disease ›› 2024, Vol. 5 ›› Issue (2): 113-119.doi: 10.19983/j.issn.2096-8493.2024016
• Original Articles • Previous Articles Next Articles
Yuan Yonglong1,2, Li Huimei3, Ma Dedong1()
Received:
2023-12-14
Online:
2024-04-20
Published:
2024-04-11
Contact:
Ma Dedong
E-mail:ma@qiluhuxi.com
CLC Number:
Yuan Yonglong, Li Huimei, Ma Dedong. Metagenomic next-generation sequencing assisted in the diagnosis of psittacosis: a case report and literature review[J]. Journal of Tuberculosis and Lung Disease , 2024, 5(2): 113-119. doi: 10.19983/j.issn.2096-8493.2024016
Add to citation manager EndNote|Ris|BibTeX
URL: http://www.jtbld.cn/EN/10.19983/j.issn.2096-8493.2024016
[1] | Beeckman DS, Vanrompay DC. Zoonotic Chlamydophila psittaci infections from a clinical perspective. Clin Microbiol Infect, 2009, 15(1):11-17. doi:10.1111/j.1469-0691.2008.02669.x. |
[2] | Branley JM, Weston KM, England J, et al. Clinical features of endemic community-acquired psittacosis. New Microbes New Infect, 2014, 2(1): 7-12. doi:10.1002/2052-2975.29. |
[3] |
Balsamo G, Maxted AM, Midla JW, et al. Compendium of Measures to Control Chlamydia psittaci Infection Among Humans (Psittacosis) and Pet Birds (Avian Chlamydiosis), 2017. J Avian Med Surg, 2017, 31(3): 262-282. doi:10.1647/217-265.
pmid: 28891690 |
[4] |
Zhang Z, Zhou H, Cao H, et al. Human-to-human transmission of Chlamydia psittaci in China, 2020: an epidemiological and aetiological investigation. Lancet Microbe, 2022, 3(7):e512-e520. doi:10.1016/S2666-5247(22)00064-7.
pmid: 35617977 |
[5] |
Ravichandran K, Anbazhagan S, Karthik K, et al. A comprehensive review on avian chlamydiosis: a neglected zoonotic disease. Trop Anim Health Prod, 2021, 53(4):414. doi:10.1007/s11250-021-02859-0.
pmid: 34312716 |
[6] | 刘威, 万佳, 陈亿雄, 等. 深圳市两起鹦鹉热疫情的流行病学调查和感染路径分析. 新发传染病电子杂志, 2023, 8(4): 36-40. doi:10.19871/j.cnki.xfcrbzz.2023.04.008. |
[7] | Guedel S, Hilpert F, Fouet P, et al. Chlamydia psittaci pneumonia. Diagnostic and therapeutic problems. Presse Med, 1990, 19(27):1282-1283. |
[8] |
Kaleta EF, Taday EM. Avian host range of Chlamydophila spp. based on isolation, antigen detection and serology. Avian Pathol, 2003, 32(5): 435-461. doi:10.1080/03079450310001593613.
pmid: 14522700 |
[9] |
Knittler MR, Sachse K. Chlamydia psittaci: update on an underestimated zoonotic agent. Pathog Dis, 2015, 73(1):1-15. doi:10.1093/femspd/ftu007.
pmid: 25853998 |
[10] |
Longbottom D, Coulter LJ. Animal chlamydioses and zoonotic implications. J Comp Pathol, 2003, 128(4): 217-244. doi:10.1053/jcpa.2002.0629.
pmid: 12834606 |
[11] |
Cong W, Huang SY, Zhang XY, et al. Seroprevalence of Chlamydia psittaci infection in market-sold adult chickens, ducks and pigeons in north-western China. J Med Microbiol, 2013, 62(Pt 8): 1211-1214. doi:10.1099/jmm.0.059287-0.
pmid: 23699067 |
[12] |
Sachse K, Laroucau K, Hotzel H, et al. Genotyping of Chlamydophila psittaci using a new DNA microarray assay based on sequence analysis of ompA genes. BMC Microbiol, 2008, 8: 63. doi:10.1186/1471-2180-8-63.
pmid: 18419800 |
[13] | Wolff BJ, Morrison SS, Pesti D, et al. Chlamydia psittaci comparative genomics reveals intraspecies variations in the putative outer membrane and type Ⅲ secretion system genes. Microbiology (Reading), 2015, 161(7): 1378-1391. doi:10.1099/mic.0.000097. |
[14] | Centers for Disease Control and Prevention. Compendium of measures to control Chlamydia psittaci infection among humans (psittacosis) and pet birds (avian chlamydiosis), 2000. MMWR Recomm Rep, 2000, 49(RR-8): 3-17. |
[15] |
Hogerwerf L, DE Gier B, Baan B, et al. Chlamydia psittaci (psittacosis) as a cause of community-acquired pneumonia: a systematic review and meta-analysis. Epidemiol Infect, 2017, 145(15): 3096-3105. doi:10.1017/S0950268817002060.
pmid: 28946931 |
[16] | Qu J, Zhang J, Chen Y, et al. Aetiology of severe community acquired pneumonia in adults identified by combined detection methods: a multi-centre prospective study in China. Emerg Microbes Infect, 2022, 11(1):556-566. doi:10.1080/22221751.2022.2035194. |
[17] | Li X, Xiao T, Hu P, et al. Clinical, radiological and patholo-gical characteristics of moderate to fulminant psittacosis pneumonia. PLoS One, 2022, 17(7): e0270896. doi:10.1371/journal.pone.0270896. |
[18] |
Rodolakis A. In vitro and in vivo properties of chemically induced temperature-sensitive mutants of Chlamydia psittaci var. ovis: screening in a murine model. Infect Immun, 1983, 42(2): 525-530. doi:10.1128/iai.42.2.525-530.1983.
pmid: 6642642 |
[19] | 宋慧慧, 唐昊. 鹦鹉热衣原体致免疫受损患者重症肺炎一例并文献复习. 中国呼吸与危重监护杂志, 2022, 21(1): 12-19. doi:10.7507/1671-6205.202102033. |
[20] |
Nieuwenhuizen AA, Dijkstra F, Notermans DW, et al. Laboratory methods for case finding in human psittacosis outbreaks: a systematic review. BMC Infect Dis, 2018, 18(1): 442. doi:10.1186/s12879-018-3317-0.
pmid: 30165831 |
[21] |
Senn L, Greub G. Local newspaper as a diagnostic aid for psittacosis: a case report. Clin Infect Dis, 2008, 46(12):1931-1932. doi:10.1086/588562.
pmid: 18540809 |
[22] |
Levison DA, Guthrie W, Ward C, et al. Infective endocarditis as part of psittacosis. Lancet, 1971, 2(7729): 844-847. doi:10.1016/s0140-6736(71)90221-2.
pmid: 4106872 |
[23] | Carr-Locke DL, Mair HJ. Neurological presentation of psittacosis during a small outbreak in Leicestershire. Br Med J, 1976, 2(6040): 853-854. doi:10.1136/bmj.2.6040.853-a. |
[24] | Samra Z, Pik A, Guidetti-Sharon A, et al. Hepatitis in a family infected by Chlamydia psittaci. J R Soc Med, 1991, 84(6): 347-348. doi:10.1177/014107689108400614. |
[25] | Ionescu AM, Khare D, Kavi J. Birds of a feather: an uncommon cause of pneumonia and meningoencephalitis. BMJ Case Rep, 2016, 2016: bcr2016216879. doi:10.1136/bcr-2016-216879. |
[26] |
Rybarczyk J, Versteele C, Lernout T, et al. Human psittacosis: a review with emphasis on surveillance in Belgium. Acta Clin Belg, 2020, 75(1): 42-48. doi:10.1080/17843286.2019.1590889.
pmid: 30882289 |
[27] |
Kawamura S, Ikematsu H, Ogimoto H. Two cases of psittacosis accompanied with rhabdomyolysis. Kansenshogaku Zasshi, 1990, 64(9): 1239-1243. doi:10.11150/kansenshogakuzasshi1970.64.1239.
pmid: 2243196 |
[28] | Hamilton DV. Psittacosis and disseminated intravascular coagulation. Br Med J, 1975, 2(5967): 370. doi:10.1136/bmj.2.5967.370. |
[29] | Laidlaw E, Mulligan RA. Letter: Psittacosis and disseminated intravascular coagulation. Br Med J, 1975, 2(5972): 688. doi:10.1136/bmj.2.5972.unknown. |
[30] | Sun L, Li P, Pang B, et al. Gestational Psittacosis With Secondary Hemophagocytic Syndrome: A Case Report and Literature Review. Front Med (Lausanne), 2021, 8: 755669. doi:10.3389/fmed.2021.755669. |
[31] |
Wong KF, Chan JK, Chan CH, et al. Psittacosis-associated hemophagocytic syndrome. Am J Med, 1991, 91(2): 204-205. doi:10.1016/0002-9343(91)90019-t.
pmid: 1867249 |
[32] | Paul L, Comstock J, Edes K, et al. Gestational Psittacosis Resulting in Neonatal Death Identified by Next-Generation RNA Sequencing of Postmortem, Formalin-Fixed Lung Tissue. Open Forum Infect Dis, 2018, 5(8):ofy172. doi:10.1093/ofid/ofy172. |
[33] |
Chen X, Cao K, Wei Y, et al. Metagenomic next-generation sequencing in the diagnosis of severe pneumonias caused by Chlamydia psittaci. Infection, 2020, 48(4): 535-542. doi:10.1007/s15010-020-01429-0.
pmid: 32314307 |
[34] |
Verweij PE, Meis JF, Eijk R, et al. Severe human psittacosis requiring artificial ventilation: case report and review. Clin Infect Dis, 1995, 20(2): 440-442. doi:10.1093/clinids/20.2.440.
pmid: 7742452 |
[35] | 张长强, 郭松喜, 刘茜, 等. 北京市密云区11例鹦鹉热衣原体肺炎临床及流行病特征分析. 中外医学研究, 2022, 20(15): 25-29. doi:10.14033/j.cnki.cfmr.2022.15.007. |
[36] | Yang F, Li J, Qi B, et al. Clinical Symptoms and Outcomes of Severe Pneumonia Caused by Chlamydia psittaci in Southwest China. Front Cell Infect Microbiol, 2022, 11: 727594. doi:10.3389/fcimb.2021.727594. |
[37] |
Su S, Su X, Zhou L, et al. Severe Chlamydia psittaci pneumonia: clinical characteristics and risk factors. Ann Palliat Med, 2021, 10(7):8051-8060. doi:10.21037/apm-21-1502.
pmid: 34353090 |
[38] | Wu HH, Feng LF, Fang SY. Application of metagenomic next-generation sequencing in the diagnosis of severe pneumonia caused by Chlamydia psittaci. BMC Pulm Med, 2021, 21(1): 300. doi:10.1186/s12890-021-01673-6. |
[39] |
Yin Q, Li Y, Pan H, et al. Atypical pneumonia caused by Chlamydia psittaci during the COVID-19 pandemic. Int J Infect Dis, 2022, 122: 622-627. doi:10.1016/j.ijid.2022.07.027.
pmid: 35842216 |
[40] |
Schlaberg R, Chiu CY, Miller S, et al. Validation of Metagenomic Next-Generation Sequencing Tests for Universal Pathogen Detection. Arch Pathol Lab Med, 2017, 141(6): 776-786. doi:10.5858/arpa.2016-0539-RA.
pmid: 28169558 |
[41] | 高晔, 李菲, 孙小富, 等. 宏基因组二代测序协助诊断重症鹦鹉热衣原体肺炎伴急性呼吸窘迫综合征一例. 华西医学, 2022, 37(8): 1273-1277. doi:10.7507/1002-0179.202206014. |
[42] | Wilson MR, Naccache SN, Samayoa E, et al. Actionable diagnosis of neuroleptospirosis by next-generation sequencing. N Engl J Med, 2014, 370(25): 2408-2417. doi:10.1056/NEJMoa1401268. |
[43] | Langelier C, Kalantar KL, Moazed F, et al. Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults. Proc Natl Acad Sci U S A, 2018, 115(52): E12353-E12362. doi:10.1073/pnas.1809700115. |
[44] |
van Boheemen S, van Rijn AL, Pappas N, et al. Retrospective Validation of a Metagenomic Sequencing Protocol for Combined Detection of RNA and DNA Viruses Using Respiratory Samples from Pediatric Patients. J Mol Diagn, 2020, 22(2): 196-207. doi:10.1016/j.jmoldx.2019.10.007.
pmid: 31837435 |
[45] |
Zinter MS, Dvorak CC, Mayday MY, et al. Pulmonary Metagenomic Sequencing Suggests Missed Infections in Immunocompromised Children. Clin Infect Dis, 2019, 68(11): 1847-1855. doi:10.1093/cid/ciy802.
pmid: 30239621 |
[46] | Duan Z, Gao Y, Liu B, et al. The Application Value of Metagenomic and Whole-Genome Capture Next-Generation Sequencing in the Diagnosis and Epidemiological Analysis of Psittacosis. Front Cell Infect Microbiol, 2022, 12: 872899. doi:10.3389/fcimb.2022.872899. |
[47] |
Shi Y, Chen J, Shi X, et al. A case of chlamydia psittaci caused severe pneumonia and meningitis diagnosed by metagenome next-generation sequencing and clinical analysis: a case report and literature review. BMC Infect Dis, 2021, 21(1):621. doi:10.1186/s12879-021-06205-5.
pmid: 34193063 |
[48] | 沈凌, 田贤江, 梁荣章, 等. 鹦鹉热衣原体肺炎48例临床特征分析. 中华结核和呼吸杂志, 2021, 44(10): 886-891. doi:10.3760/cma.j.cn112147-20210127-00082. |
[49] | Mojoli F, Bouhemad B, Mongodi S, et al. Lung Ultrasound for Critically Ill Patients. Am J Respir Crit Care Med, 2019, 199(6): 701-714. doi:10.1164/rccm.201802-0236CI. |
[50] | 李田田, 朱淼, 左华芹, 等. 重症鹦鹉热衣原体肺炎的早期影像学特征分析. 临床放射学杂志, 2023, 42(8): 1238-1242. doi:10.13437/j.cnki.jcr.2023.08.002. |
[51] | Shapiro DS, Kenney SC, Johnson M, et al. Brief report: Chlamydia psittaci endocarditis diagnosed by blood culture. N Engl J Med, 1992, 326(18): 1192-1195. doi:10.1056/NEJM199204303261805. |
[52] |
Kohlhoff SA, Hammerschlag MR. Treatment of Chlamydial infections: 2014 update. Expert Opin Pharmacother, 2015, 16(2): 205-212. doi:10.1517/14656566.2015.999041.
pmid: 25579069 |
[53] | Tang J, Tan W, Luo L, et al. Application of Metagenomic Next-Generation Sequencing in the Diagnosis of Pneumonia Caused by Chlamydia psittaci. Microbiol Spectr, 2022, 10(4): e0238421. doi:10.1128/spectrum.02384-21. |
[54] |
DE Boeck C, Dehollogne C, Dumont A, et al. Managing a cluster outbreak of psittacosis in Belgium linked to a pet shop visit in The Netherlands. Epidemiol Infect, 2016, 144(8):1710-1716. doi:10.1017/S0950268815003106.
pmid: 26669637 |
[55] | 中华医学会呼吸病学分会. 中国成人社区获得性肺炎诊断和治疗指南(2016年版). 中华结核和呼吸杂志, 2016, 39(4): 253-279. doi:10.3760/cma.j.issn.1001-0939.2016.04.005. |
[56] |
Olson G, Davis AM. Diagnosis and Treatment of Adults With Community-Acquired Pneumonia. JAMA, 2020, 323(9): 885-886. doi:10.1001/jama.2019.21118.
pmid: 32027358 |
[57] | Katsura D, Tsuji S, Kimura F, et al. Gestational psittacosis: A case report and literature review. J Obstet Gynaecol Res, 2020, 46(5): 673-677. doi:10.1111/jog.14217. |
[58] | Jain S, Self WH, Wunderink RG, et al. Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults. N Engl J Med, 2015, 373(5): 415-427. doi:10.1056/NEJMoa1500245. |
[59] | 宏基因组学测序技术在中重症感染中的临床应用共识专家组, 中国研究型医院学会脓毒症与休克专业委员会, 中国微生物学会微生物毒素专业委员会, 等. 宏基因组学测序技术在中重症感染中的临床应用专家共识(第一版). 中华危重病急救医学, 2020, 32(5): 531-536. doi:10.3760/cma.j.cn121430-20200228-00095. |
[60] | Miao Q, Ma Y, Wang Q, et al. Microbiological Diagnostic Performance of Metagenomic Next-generation Sequencing When Applied to Clinical Practice. Clin Infect Dis, 2018, 67(suppl_2):S231-S240. doi:10.1093/cid/ciy693. |
[1] | Yao Xiaowei, Liu Shuren, Jing Yanse, Jia Chenguang. Evaluation of next generation sequencing for the diagnosis of osteoarticular tuberculosis infection [J]. Journal of Tuberculosis and Lung Disease, 2024, 5(1): 37-43. |
[2] | National Center of Medical Quality Control for Respiratory Diseases , Tuberculosis Branch of Chinese Medical Association , Tuberculosis Control Branch of Chinese Antituberculosis Association , China⁃Japan Friendship Hospital . Clinical practice guidelines for early detection of pulmonary tuberculosis in general medical facilities [J]. Journal of Tuberculosis and Lung Disease, 2024, 5(1): 1-14. |
[3] | Lin Rongmei, Lu Nihong. Current status of myocardial injury associated with the coronavirus disease 2019 [J]. Journal of Tuberculosis and Lung Disease, 2023, 4(6): 493-498. |
[4] | Cui Yanan, Chen Yan. Programmed cell death and its research progress in chronic obstructive pulmonary disease [J]. Journal of Tuberculosis and Lung Disease, 2023, 4(5): 397-406. |
[5] | Lu Yu, Wang Xiaodong. Research progress of non-drug therapy for chronic obstructive pulmonary disease-related fatigue [J]. Journal of Tuberculosis and Lung Disease, 2023, 4(3): 240-245. |
[6] | Gao Wenwan, Guo Jianqiong, Li Tongxin, Han Mei, Yan Xiaofeng, Yang Song, Tang Shenjie. The interpretation of the key points of the Expert Consensus on Immunotherapy for Tuberculosis (2022 edition) [J]. Journal of Tuberculosis and Lung Disease, 2023, 4(3): 194-197. |
[7] | Fan Mingkuan, Zhang Hui. Interpretation of the Evidence-based Guidelines for Active Screening of Pulmonary Tuberculosis in Chinese Communities [J]. Journal of Tuberculosis and Lung Disease, 2023, 4(1): 1-4. |
[8] | Lou Nannan, Guo Jing, Ma Xiang, Gai Zhongtao. Research progress in pathological mechanism and treatment of cough variant asthma [J]. Journal of Tuberculosis and Lung Disease, 2022, 3(6): 521-525. |
[9] | ZHANG Yan-kun, GUAN Yan, ZHAI Jing-jie, HAN Zhao. Application of anti-neovascular endothelial growth factor therapy in tuberculous chorioretinopathy: a case report and literature review [J]. Journal of Tuberculosis and Lung Disease, 2022, 3(3): 222-226. |
[10] | YANG Yang, LU Shui-hua. Adult-onset mendelian susceptibility to mycobacterial disease: a case report and literature review [J]. Journal of Tuberculosis and Lung Disease, 2020, 1(3): 226-232. |
[11] | Jie ZHANG,Yu-qin LIU,Yu-ze LI,Li-qing HAN,Shu-qin LIU,Hong-ming LI,Yang SUN,Yu-ling QI. Renal tuberculosis as manifestation of autonephrectomy in two cases and literature review [J]. Journal of Tuberculosis and Lung Health, 2018, 7(4): 255-260. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||